WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28B8.5 Sequence Name  T28B8.5
Length (nt)  1584   Chromosome Location  I: 8139505-8139621
Chromosome . Primary Identifier  I Chromosome Location . Start  8139505
Chromosome Location . End  8139621
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28B8.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32505 DEL-4 59.2 527 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054386
WBRNAi00036072
WBRNAi00092989

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28B8.5 8139505 8139621 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012116 del-4 T28B8.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28B8.5 8139505 8139621 -1
CDS:T28B8.5 8139668 8139841 -1
CDS:T28B8.5 8139885 8140034 -1
CDS:T28B8.5 8140082 8140139 -1
CDS:T28B8.5 8140217 8140298 -1
CDS:T28B8.5 8140370 8140648 -1
CDS:T28B8.5 8140696 8140895 -1
CDS:T28B8.5 8141359 8141435 -1
CDS:T28B8.5 8141701 8141832 -1
CDS:T28B8.5 8141976 8142077 -1
CDS:T28B8.5 8142282 8142387 -1
CDS:T28B8.5 8142431 8142537 -1

1 Sequence

Length
1584

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28B8.5.1 T28B8.5.1 1621   I: 8139468-8142537