WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H8.1a.1 Sequence Name  T01H8.1a.1
Length (nt)  2874   Chromosome Location  I: 8573852-8580151
Chromosome . Primary Identifier  I Chromosome Location . Start  8573852
Chromosome Location . End  8580151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011352 rskn-1 T01H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H8.1a T01H8.1a 2355   I: 8574339-8574339

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.1a.1 8573852 8580151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22452   488   I: 8573852-8574339 Caenorhabditis elegans
Exon22456   143   I: 8574433-8574575 Caenorhabditis elegans
Exon22462   360   I: 8574813-8575172 Caenorhabditis elegans
Exon22467   244   I: 8575222-8575465 Caenorhabditis elegans
Exon22472   233   I: 8575517-8575749 Caenorhabditis elegans
Exon22477   421   I: 8575797-8576217 Caenorhabditis elegans
Exon22482   71   I: 8576264-8576334 Caenorhabditis elegans
Exon22487   181   I: 8576379-8576559 Caenorhabditis elegans
Exon22492   187   I: 8576608-8576794 Caenorhabditis elegans
Exon22497   163   I: 8576845-8577007 Caenorhabditis elegans
Exon22502   117   I: 8577058-8577174 Caenorhabditis elegans
Exon22508   117   I: 8578787-8578903 Caenorhabditis elegans
Exon22513   149   I: 8580003-8580151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.1a.1 8573852 8580151 -1

1 Sequence

Length
2874

1 Sequence Ontology Term

Identifier Name Description
transcript