WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01H8.1a Sequence Name  T01H8.1a
Length (nt)  2355   Chromosome Location  I: 8574339-8574339
Chromosome . Primary Identifier  I Chromosome Location . Start  8574339
Chromosome Location . End  8574339
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34493 RSKN-1, isoform a 88.1 784 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00001870
WBRNAi00052178
WBRNAi00099890
WBRNAi00004099
WBRNAi00108303
WBRNAi00108304
WBRNAi00099688
WBRNAi00099284
WBRNAi00099486
WBRNAi00116978
WBRNAi00087956

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01H8.1a 8574339 8574339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011352 rskn-1 T01H8.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01H8.1a 8574339 8574339 -1
CDS:T01H8.1a 8574433 8574575 -1
CDS:T01H8.1a 8574813 8575172 -1
CDS:T01H8.1a 8575222 8575465 -1
CDS:T01H8.1a 8575517 8575749 -1
CDS:T01H8.1a 8575797 8576217 -1
CDS:T01H8.1a 8576264 8576334 -1
CDS:T01H8.1a 8576379 8576559 -1
CDS:T01H8.1a 8576608 8576794 -1
CDS:T01H8.1a 8576845 8577007 -1
CDS:T01H8.1a 8577058 8577174 -1
CDS:T01H8.1a 8578787 8578903 -1
CDS:T01H8.1a 8580003 8580119 -1

1 Sequence

Length
2355

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01H8.1a.1 T01H8.1a.1 2874   I: 8573852-8580151