WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D11.8.1 Sequence Name  R05D11.8.1
Length (nt)  2188   Chromosome Location  I: 8602125-8605162
Chromosome . Primary Identifier  I Chromosome Location . Start  8602125
Chromosome Location . End  8605162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D11.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011036 edc-3 R05D11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D11.8 R05D11.8 1701   I: 8602154-8602275

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05D11.8.1 8602125 8605162 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22557   151   I: 8602125-8602275 Caenorhabditis elegans
Exon22558   287   I: 8602321-8602607 Caenorhabditis elegans
Exon22559   107   I: 8602728-8602834 Caenorhabditis elegans
Exon22560   115   I: 8602882-8602996 Caenorhabditis elegans
Exon22561   146   I: 8603046-8603191 Caenorhabditis elegans
Exon22562   164   I: 8603237-8603400 Caenorhabditis elegans
Exon22563   100   I: 8603447-8603546 Caenorhabditis elegans
Exon22564   276   I: 8603594-8603869 Caenorhabditis elegans
Exon22565   268   I: 8604275-8604542 Caenorhabditis elegans
Exon22566   574   I: 8604589-8605162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05D11.8.1 8602125 8605162 1

1 Sequence

Length
2188

1 Sequence Ontology Term

Identifier Name Description
transcript