WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05D11.8 Sequence Name  R05D11.8
Length (nt)  1701   Chromosome Location  I: 8602154-8602275
Chromosome . Primary Identifier  I Chromosome Location . Start  8602154
Chromosome Location . End  8602275
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D11.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06243 EDC-3 62.6 566 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00051272
WBRNAi00034599
WBRNAi00004048
WBRNAi00008235
WBRNAi00079542
WBRNAi00079680
WBRNAi00079726
WBRNAi00079818
WBRNAi00079496
WBRNAi00079588
WBRNAi00079634
WBRNAi00079772

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05D11.8 8602154 8602275 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011036 edc-3 R05D11.8 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05D11.8 8602154 8602275 1
CDS:R05D11.8 8602321 8602607 1
CDS:R05D11.8 8602728 8602834 1
CDS:R05D11.8 8602882 8602996 1
CDS:R05D11.8 8603046 8603191 1
CDS:R05D11.8 8603237 8603400 1
CDS:R05D11.8 8603447 8603546 1
CDS:R05D11.8 8603594 8603869 1
CDS:R05D11.8 8604275 8604542 1
CDS:R05D11.8 8604589 8604704 1

1 Sequence

Length
1701

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05D11.8.1 R05D11.8.1 2188   I: 8602125-8605162