WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39H11.2a.1 Sequence Name  F39H11.2a.1
Length (nt)  2344   Chromosome Location  I: 8697504-8701971
Chromosome . Primary Identifier  I Chromosome Location . Start  8697504
Chromosome Location . End  8701971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006577 tlf-1 F39H11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H11.2a F39H11.2a 1518   I: 8698316-8698372

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39H11.2a.1 8697504 8701971 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22896   869   I: 8697504-8698372 Caenorhabditis elegans
Exon22898   67   I: 8698449-8698515 Caenorhabditis elegans
Exon22900   317   I: 8698568-8698884 Caenorhabditis elegans
Exon22902   279   I: 8699795-8700073 Caenorhabditis elegans
Exon22904   96   I: 8700120-8700215 Caenorhabditis elegans
Exon22906   237   I: 8700263-8700499 Caenorhabditis elegans
Exon22908   116   I: 8700759-8700874 Caenorhabditis elegans
Exon22910   82   I: 8701341-8701422 Caenorhabditis elegans
Exon22912   111   I: 8701527-8701637 Caenorhabditis elegans
Exon22914   118   I: 8701717-8701834 Caenorhabditis elegans
Exon22916   52   I: 8701920-8701971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39H11.2a.1 8697504 8701971 -1

1 Sequence

Length
2344

1 Sequence Ontology Term

Identifier Name Description
transcript