WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Hide

Oops!

http://intermine.wormbase.org/tools/wormmine/service/ is incorrect

mRNA :

WormMine ID  Transcript:F55H12.5.1 Sequence Name  F55H12.5.1
Length (nt)  988   Chromosome Location  I: 8869715-8871531
Chromosome . Primary Identifier  I Chromosome Location . Start  8869715
Chromosome Location . End  8871531 Method  Coding_transcript
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55H12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010136 spe-54 F55H12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55H12.5 F55H12.5 864   I: 8870107-8870232

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55H12.5.1 8869715 8871531 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23569   66   I: 8869715-8869780 Caenorhabditis elegans
Exon23572   129   I: 8870104-8870232 Caenorhabditis elegans
Exon23574   127   I: 8870338-8870464 Caenorhabditis elegans
Exon23577   84   I: 8870633-8870716 Caenorhabditis elegans
Exon23580   121   I: 8870762-8870882 Caenorhabditis elegans
Exon23583   222   I: 8870952-8871173 Caenorhabditis elegans
Exon23586   90   I: 8871241-8871330 Caenorhabditis elegans
Exon23589   149   I: 8871383-8871531 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55H12.5.1 8869715 8871531 1

1 Sequence

Length
988

1 Sequence Ontology Term

Identifier Name Description
transcript