WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55H12.5 Sequence Name  F55H12.5
Length (nt)  864   Chromosome Location  I: 8870107-8870232
Chromosome . Primary Identifier  I Chromosome Location . Start  8870107
Chromosome Location . End  8870232
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55H12.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32441 SPE-54 32.2 287 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001061
WBRNAi00048564
WBRNAi00003801

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55H12.5 8870107 8870232 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010136 spe-54 F55H12.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55H12.5 8870107 8870232 1
CDS:F55H12.5 8870338 8870464 1
CDS:F55H12.5 8870633 8870716 1
CDS:F55H12.5 8870762 8870882 1
CDS:F55H12.5 8870952 8871173 1
CDS:F55H12.5 8871241 8871330 1
CDS:F55H12.5 8871383 8871476 1

1 Sequence

Length
864

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55H12.5.1 F55H12.5.1 988   I: 8869715-8871531
Transcript:F55H12.5.2 F55H12.5.2 970   I: 8869729-8871531
Transcript:F55H12.5.3 F55H12.5.3 928   I: 8870098-8871531