WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36F2.3a.1 Sequence Name  F36F2.3a.1
Length (nt)  3662   Chromosome Location  I: 9009012-9013885
Chromosome . Primary Identifier  I Chromosome Location . Start  9009012
Chromosome Location . End  9013885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36F2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009477 rbpl-1 F36F2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36F2.3a F36F2.3a 3387   I: 9009260-9009340

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36F2.3a.1 9009012 9013885 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23966   329   I: 9009012-9009340 Caenorhabditis elegans
Exon23968   66   I: 9009386-9009451 Caenorhabditis elegans
Exon23970   426   I: 9009521-9009946 Caenorhabditis elegans
Exon23972   967   I: 9010067-9011033 Caenorhabditis elegans
Exon23974   336   I: 9011080-9011415 Caenorhabditis elegans
Exon23975   177   I: 9011473-9011649 Caenorhabditis elegans
Exon23976   212   I: 9011823-9012034 Caenorhabditis elegans
Exon23977   456   I: 9012124-9012579 Caenorhabditis elegans
Exon23978   147   I: 9012627-9012773 Caenorhabditis elegans
Exon23979   103   I: 9013088-9013190 Caenorhabditis elegans
Exon23981   80   I: 9013296-9013375 Caenorhabditis elegans
Exon23983   79   I: 9013423-9013501 Caenorhabditis elegans
Exon23985   110   I: 9013554-9013663 Caenorhabditis elegans
Exon23988   174   I: 9013712-9013885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36F2.3a.1 9009012 9013885 -1

1 Sequence

Length
3662

1 Sequence Ontology Term

Identifier Name Description
transcript