WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F36F2.3a Sequence Name  F36F2.3a
Length (nt)  3387   Chromosome Location  I: 9009260-9009340
Chromosome . Primary Identifier  I Chromosome Location . Start  9009260
Chromosome Location . End  9009340
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36F2.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34550 RBPL-1, isoform a 130.4 1128 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00094669
WBRNAi00046495
WBRNAi00081374
WBRNAi00116741
WBRNAi00076382
WBRNAi00000047
WBRNAi00025405
WBRNAi00025406
WBRNAi00114521
WBRNAi00065865
WBRNAi00112087
WBRNAi00079011
WBRNAi00079012
WBRNAi00091372
WBRNAi00091373
WBRNAi00091384
WBRNAi00091395
WBRNAi00110842

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F36F2.3a 9009260 9009340 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009477 rbpl-1 F36F2.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F36F2.3a 9009260 9009340 -1
CDS:F36F2.3a 9009386 9009451 -1
CDS:F36F2.3a 9009521 9009946 -1
CDS:F36F2.3a 9010067 9011033 -1
CDS:F36F2.3a 9011080 9011415 -1
CDS:F36F2.3a 9011473 9011649 -1
CDS:F36F2.3a 9011823 9012034 -1
CDS:F36F2.3a 9012124 9012579 -1
CDS:F36F2.3a 9012627 9012773 -1
CDS:F36F2.3a 9013088 9013190 -1
CDS:F36F2.3a 9013296 9013375 -1
CDS:F36F2.3a 9013423 9013501 -1
CDS:F36F2.3a 9013554 9013663 -1
CDS:F36F2.3a 9013712 9013858 -1

1 Sequence

Length
3387

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F36F2.3a.1 F36F2.3a.1 3662   I: 9009012-9013885