WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H5.3c.2 Sequence Name  F25H5.3c.2
Length (nt)  2036   Chromosome Location  I: 9174219-9177485
Chromosome . Primary Identifier  I Chromosome Location . Start  9174219
Chromosome Location . End  9177485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.3c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009126 pyk-1 F25H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H5.3c F25H5.3c 1596   I: 9174290-9174339

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.3c.2 9174219 9177485 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24455   121   I: 9174219-9174339 Caenorhabditis elegans
Exon24462   208   I: 9174995-9175202 Caenorhabditis elegans
Exon24468   675   I: 9175280-9175954 Caenorhabditis elegans
Exon24474   120   I: 9176002-9176121 Caenorhabditis elegans
Exon24481   499   I: 9176517-9177015 Caenorhabditis elegans
Exon24486   413   I: 9177073-9177485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.3c.2 9174219 9177485 1

1 Sequence

Length
2036

1 Sequence Ontology Term

Identifier Name Description
transcript