WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25H5.3c Sequence Name  F25H5.3c
Length (nt)  1596   Chromosome Location  I: 9174290-9174339
Chromosome . Primary Identifier  I Chromosome Location . Start  9174290
Chromosome Location . End  9174339
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36135 PYK-1, isoform c 57.4 531 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00095585
WBRNAi00003465
WBRNAi00092305
WBRNAi00045548
WBRNAi00031397
WBRNAi00096849
WBRNAi00096359
WBRNAi00096442
WBRNAi00096525
WBRNAi00096624
WBRNAi00092265
WBRNAi00092266

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25H5.3c 9174290 9174339 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009126 pyk-1 F25H5.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25H5.3c 9174290 9174339 1
CDS:F25H5.3c 9174995 9175202 1
CDS:F25H5.3c 9175280 9175954 1
CDS:F25H5.3c 9176002 9176121 1
CDS:F25H5.3c 9176517 9177015 1
CDS:F25H5.3c 9177073 9177116 1

1 Sequence

Length
1596

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25H5.3c.1 F25H5.3c.1 2399   I: 9173859-9177488
Transcript:F25H5.3c.2 F25H5.3c.2 2036   I: 9174219-9177485