WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C12C8.3b Sequence Name  C12C8.3b
Length (nt)  3432   Chromosome Location  I: 9335965-9336126
Chromosome . Primary Identifier  I Chromosome Location . Start  9335965
Chromosome Location . End  9336126
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12C8.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27063 LIN-41, isoform b 123.7 1143 Caenorhabditis elegans
 

Other

64 RNAi

WormBase ID
WBRNAi00096310
WBRNAi00095492
WBRNAi00096308
WBRNAi00094734
WBRNAi00061039
WBRNAi00061040
WBRNAi00024540
WBRNAi00077068
WBRNAi00077069
WBRNAi00099772
WBRNAi00100352
WBRNAi00085490
WBRNAi00065398
WBRNAi00024541
WBRNAi00040374
WBRNAi00002947
WBRNAi00076115
WBRNAi00061029
WBRNAi00028817
WBRNAi00100726
WBRNAi00071039
WBRNAi00099570
WBRNAi00099166
WBRNAi00099368
WBRNAi00078060
WBRNAi00063924
WBRNAi00096256
WBRNAi00095873
WBRNAi00100913
WBRNAi00096515

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C12C8.3b 9335965 9336126 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:C12C8.3b 9335965 9336126 -1
CDS:C12C8.3b 9336173 9336443 -1
CDS:C12C8.3b 9336491 9337168 -1
CDS:C12C8.3b 9337214 9337426 -1
CDS:C12C8.3b 9337787 9338158 -1
CDS:C12C8.3b 9338208 9338287 -1
CDS:C12C8.3b 9338503 9338804 -1
CDS:C12C8.3b 9338856 9338952 -1
CDS:C12C8.3b 9340020 9340143 -1
CDS:C12C8.3b 9340198 9340469 -1
CDS:C12C8.3b 9340857 9341128 -1
CDS:C12C8.3b 9341176 9341316 -1
CDS:C12C8.3b 9341360 9341409 -1
CDS:C12C8.3b 9341453 9341714 -1
CDS:C12C8.3b 9341762 9341897 -1

1 Sequence

Length
3432

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C12C8.3b.2 C12C8.3b.2 4613   I: 9334806-9341919
Transcript:C12C8.3b.1 C12C8.3b.1 4785   I: 9334807-9342496