WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C41G7.1b Sequence Name  C41G7.1b
Length (nt)  624   Chromosome Location  I: 9511283-9511497
Chromosome . Primary Identifier  I Chromosome Location . Start  9511283
Chromosome Location . End  9511497
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41G7.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27843 SMN-1, isoform b 22.9 207 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00070476
WBRNAi00094308
WBRNAi00042315
WBRNAi00024793
WBRNAi00024794
WBRNAi00030287
WBRNAi00103034
WBRNAi00090763
WBRNAi00094034
WBRNAi00113515
WBRNAi00116744
WBRNAi00002092
WBRNAi00003132
WBRNAi00108107
WBRNAi00094424
WBRNAi00081094
WBRNAi00070474
WBRNAi00070473
WBRNAi00070475
WBRNAi00110410
WBRNAi00110411
WBRNAi00108101

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C41G7.1b 9511283 9511497 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004887 smn-1 C41G7.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C41G7.1b 9511283 9511497 -1
CDS:C41G7.1b 9511545 9511785 -1
CDS:C41G7.1b 9511834 9511899 -1
CDS:C41G7.1b 9511943 9512020 -1
CDS:C41G7.1b 9512075 9512098 -1

1 Sequence

Length
624

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C41G7.1b.1 C41G7.1b.1 624   I: 9511283-9512098