WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36F7.4f.1 Sequence Name  C36F7.4f.1
Length (nt)  1311   Chromosome Location  I: 9565477-9573934
Chromosome . Primary Identifier  I Chromosome Location . Start  9565477
Chromosome Location . End  9573934 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36F7.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004372 rig-5 C36F7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36F7.4f C36F7.4f 1296   I: 9565492-9565577

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36F7.4f.1 9565477 9573934 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25717   101   I: 9565477-9565577 Caenorhabditis elegans
Exon25724   96   I: 9566048-9566143 Caenorhabditis elegans
Exon25726   78   I: 9566375-9566452 Caenorhabditis elegans
Exon25733   45   I: 9566694-9566738 Caenorhabditis elegans
Exon25741   136   I: 9566917-9567052 Caenorhabditis elegans
Exon25749   152   I: 9567234-9567385 Caenorhabditis elegans
Exon25757   129   I: 9568102-9568230 Caenorhabditis elegans
Exon25763   162   I: 9571024-9571185 Caenorhabditis elegans
Exon25771   79   I: 9572150-9572228 Caenorhabditis elegans
Exon25778   141   I: 9572276-9572416 Caenorhabditis elegans
Exon25785   116   I: 9572480-9572595 Caenorhabditis elegans
Exon25788   76   I: 9573859-9573934 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36F7.4f.1 9565477 9573934 -1

1 Sequence

Length
1311

1 Sequence Ontology Term

Identifier Name Description
transcript