WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C36F7.4f Sequence Name  C36F7.4f
Length (nt)  1296   Chromosome Location  I: 9565492-9565577
Chromosome . Primary Identifier  I Chromosome Location . Start  9565492
Chromosome Location . End  9565577
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36F7.4f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47023 RIG-5, isoform f 47.9 431 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00042084
WBRNAi00003106
WBRNAi00003107
WBRNAi00116866

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C36F7.4f 9565492 9565577 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004372 rig-5 C36F7.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C36F7.4f 9565492 9565577 -1
CDS:C36F7.4f 9566048 9566143 -1
CDS:C36F7.4f 9566375 9566452 -1
CDS:C36F7.4f 9566694 9566738 -1
CDS:C36F7.4f 9566917 9567052 -1
CDS:C36F7.4f 9567234 9567385 -1
CDS:C36F7.4f 9568102 9568230 -1
CDS:C36F7.4f 9571024 9571185 -1
CDS:C36F7.4f 9572150 9572228 -1
CDS:C36F7.4f 9572276 9572416 -1
CDS:C36F7.4f 9572480 9572595 -1
CDS:C36F7.4f 9573859 9573934 -1

1 Sequence

Length
1296

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C36F7.4f.1 C36F7.4f.1 1311   I: 9565477-9573934