WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K07A1.11 Sequence Name  K07A1.11
Length (nt)  1239   Chromosome Location  I: 9616606-9616665
Chromosome . Primary Identifier  I Chromosome Location . Start  9616606
Chromosome Location . End  9616665
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A1.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11860 RBA-1 46.7 412 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00106572
WBRNAi00106596
WBRNAi00091558
WBRNAi00050084
WBRNAi00000079
WBRNAi00034028
WBRNAi00082120
WBRNAi00105920
WBRNAi00082123
WBRNAi00092456
WBRNAi00081383
WBRNAi00082118
WBRNAi00116740
WBRNAi00086454
WBRNAi00086455
WBRNAi00086211
WBRNAi00086453
WBRNAi00025890
WBRNAi00025891
WBRNAi00106647
WBRNAi00108652
WBRNAi00108577
WBRNAi00089615
WBRNAi00089585
WBRNAi00065910
WBRNAi00070007
WBRNAi00106720
WBRNAi00117636
WBRNAi00081598
WBRNAi00117638

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K07A1.11 9616606 9616665 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004312 rba-1 K07A1.11 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:K07A1.11 9616606 9616665 -1
CDS:K07A1.11 9616716 9616902 -1
CDS:K07A1.11 9616961 9617215 -1
CDS:K07A1.11 9617276 9617427 -1
CDS:K07A1.11 9617470 9617910 -1
CDS:K07A1.11 9617958 9618101 -1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K07A1.11.1 K07A1.11.1 1335   I: 9616516-9618107