WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C2.3b.1 Sequence Name  C16C2.3b.1
Length (nt)  816   Chromosome Location  I: 9715633-9717602
Chromosome . Primary Identifier  I Chromosome Location . Start  9715633
Chromosome Location . End  9717602 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007620 ocrl-1 C16C2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C2.3b C16C2.3b 816   I: 9715633-9715757

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16C2.3b.1 9715633 9717602 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26181   125   I: 9715633-9715757 Caenorhabditis elegans
Exon26184   107   I: 9715801-9715907 Caenorhabditis elegans
Exon26187   136   I: 9715957-9716092 Caenorhabditis elegans
Exon26190   400   I: 9716435-9716834 Caenorhabditis elegans
Exon26193   45   I: 9717327-9717371 Caenorhabditis elegans
Exon26194   3   I: 9717600-9717602 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16C2.3b.1 9715633 9717602 -1

1 Sequence

Length
816

1 Sequence Ontology Term

Identifier Name Description
transcript