WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16C2.3b Sequence Name  C16C2.3b
Length (nt)  816   Chromosome Location  I: 9715633-9715757
Chromosome . Primary Identifier  I Chromosome Location . Start  9715633
Chromosome Location . End  9715757
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C2.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41202 OCRL-1, isoform b 31.1 271 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00107820
WBRNAi00107818
WBRNAi00107819
WBRNAi00040693
WBRNAi00002959
WBRNAi00099097

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16C2.3b 9715633 9715757 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007620 ocrl-1 C16C2.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16C2.3b 9715633 9715757 -1
CDS:C16C2.3b 9715801 9715907 -1
CDS:C16C2.3b 9715957 9716092 -1
CDS:C16C2.3b 9716435 9716834 -1
CDS:C16C2.3b 9717327 9717371 -1
CDS:C16C2.3b 9717600 9717602 -1

1 Sequence

Length
816

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16C2.3b.1 C16C2.3b.1 816   I: 9715633-9717602