WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16C2.2a Sequence Name  C16C2.2a
Length (nt)  1422   Chromosome Location  I: 9722804-9722824
Chromosome . Primary Identifier  I Chromosome Location . Start  9722804
Chromosome Location . End  9722824
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C2.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17404 EAT-16, isoform a 54.7 473 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00089867
WBRNAi00000609
WBRNAi00001624
WBRNAi00040690
WBRNAi00040692
WBRNAi00002958
WBRNAi00028958
WBRNAi00116820
WBRNAi00089879
WBRNAi00090039
WBRNAi00090197
WBRNAi00090360
WBRNAi00090407
WBRNAi00090454
WBRNAi00090501
WBRNAi00114862

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16C2.2a 9722804 9722824 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001145 eat-16 C16C2.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16C2.2a 9722804 9722824 1
CDS:C16C2.2a 9722875 9722994 1
CDS:C16C2.2a 9723105 9723188 1
CDS:C16C2.2a 9723253 9723346 1
CDS:C16C2.2a 9723391 9723469 1
CDS:C16C2.2a 9723847 9724143 1
CDS:C16C2.2a 9724281 9724394 1
CDS:C16C2.2a 9724442 9724952 1
CDS:C16C2.2a 9724999 9725084 1
CDS:C16C2.2a 9725402 9725417 1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16C2.2a.1 C16C2.2a.1 2372   I: 9722721-9726284