WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02A11.1a.1 Sequence Name  K02A11.1a.1
Length (nt)  2274   Chromosome Location  I: 9737823-9744145
Chromosome . Primary Identifier  I Chromosome Location . Start  9737823
Chromosome Location . End  9744145 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02A11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001582 gfi-2 K02A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02A11.1a K02A11.1a 1431   I: 9740684-9740760

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02A11.1a.1 9737823 9744145 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26243   64   I: 9737823-9737886 Caenorhabditis elegans
Exon26250   83   I: 9740539-9740621 Caenorhabditis elegans
Exon26253   91   I: 9740670-9740760 Caenorhabditis elegans
Exon26260   586   I: 9741372-9741957 Caenorhabditis elegans
Exon26267   561   I: 9742364-9742924 Caenorhabditis elegans
Exon26276   130   I: 9742980-9743109 Caenorhabditis elegans
Exon26281   759   I: 9743387-9744145 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02A11.1a.1 9737823 9744145 1

1 Sequence

Length
2274

1 Sequence Ontology Term

Identifier Name Description
transcript