WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K02A11.1a Sequence Name  K02A11.1a
Length (nt)  1431   Chromosome Location  I: 9740684-9740760
Chromosome . Primary Identifier  I Chromosome Location . Start  9740684
Chromosome Location . End  9740760
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02A11.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11616 GFI-2, isoform a 53.7 476 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00000074
WBRNAi00049645
WBRNAi00072561
WBRNAi00074505
WBRNAi00074507
WBRNAi00074506
WBRNAi00074508
WBRNAi00074509
WBRNAi00074511
WBRNAi00074510
WBRNAi00074512
WBRNAi00071884
WBRNAi00076537
WBRNAi00033839
WBRNAi00071046
WBRNAi00025840
WBRNAi00072563
WBRNAi00072562
WBRNAi00025841
WBRNAi00116828
WBRNAi00061993
WBRNAi00080696

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K02A11.1a 9740684 9740760 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001582 gfi-2 K02A11.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:K02A11.1a 9740684 9740760 1
CDS:K02A11.1a 9741372 9741957 1
CDS:K02A11.1a 9742364 9742924 1
CDS:K02A11.1a 9742980 9743109 1
CDS:K02A11.1a 9743387 9743463 1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K02A11.1a.2 K02A11.1a.2 2280   I: 9737816-9744146
Transcript:K02A11.1a.1 K02A11.1a.1 2274   I: 9737823-9744145
Transcript:K02A11.1a.3 K02A11.1a.3 2211   I: 9740537-9744146
Transcript:K02A11.1a.4 K02A11.1a.4 2213   I: 9740537-9744146
Transcript:K02A11.1a.5 K02A11.1a.5 2213   I: 9740539-9744146