WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52F12.1b Sequence Name  F52F12.1b
Length (nt)  1707   Chromosome Location  I: 9888450-9888577
Chromosome . Primary Identifier  I Chromosome Location . Start  9888450
Chromosome Location . End  9888577
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52F12.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29329 OCT-1, isoform b 63.5 568 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00048007
WBRNAi00003739

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52F12.1b 9888450 9888577 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003842 oct-1 F52F12.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52F12.1b 9888450 9888577 -1
CDS:F52F12.1b 9888743 9888875 -1
CDS:F52F12.1b 9888954 9889350 -1
CDS:F52F12.1b 9889402 9889517 -1
CDS:F52F12.1b 9889566 9889752 -1
CDS:F52F12.1b 9890061 9890169 -1
CDS:F52F12.1b 9890216 9890474 -1
CDS:F52F12.1b 9890880 9890958 -1
CDS:F52F12.1b 9891017 9891099 -1
CDS:F52F12.1b 9891198 9891289 -1
CDS:F52F12.1b 9891335 9891413 -1
CDS:F52F12.1b 9891467 9891511 -1

1 Sequence

Length
1707

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52F12.1b.1 F52F12.1b.1 1833   I: 9888357-9891544