WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A1.10a.1 Sequence Name  C25A1.10a.1
Length (nt)  3158   Chromosome Location  I: 10187546-10190896
Chromosome . Primary Identifier  I Chromosome Location . Start  10187546
Chromosome Location . End  10190896 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A1.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000931 dao-5 C25A1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A1.10a C25A1.10a 2916   I: 10187772-10187930

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A1.10a.1 10187546 10190896 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27317   385   I: 10187546-10187930 Caenorhabditis elegans
Exon27320   2154   I: 10187979-10190132 Caenorhabditis elegans
Exon27322   327   I: 10190182-10190508 Caenorhabditis elegans
Exon27324   162   I: 10190557-10190718 Caenorhabditis elegans
Exon27327   130   I: 10190767-10190896 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A1.10a.1 10187546 10190896 -1

1 Sequence

Length
3158

1 Sequence Ontology Term

Identifier Name Description
transcript