WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y106G6H.3c.2 Sequence Name  Y106G6H.3c.2
Length (nt)  374   Chromosome Location  I: 10436462-10436888
Chromosome . Primary Identifier  I Chromosome Location . Start  10436462
Chromosome Location . End  10436888 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6H.3c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004444 rpl-30 Y106G6H.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y106G6H.3c Y106G6H.3c 285   I: 10436507-10436616

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6H.3c.2 10436462 10436888 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon27873   155   I: 10436462-10436616 Caenorhabditis elegans
Exon27880   219   I: 10436670-10436888 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y106G6H.3c.2 10436462 10436888 1

1 Sequence

Length
374

1 Sequence Ontology Term

Identifier Name Description
transcript