WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y106G6H.3c Sequence Name  Y106G6H.3c
Length (nt)  285   Chromosome Location  I: 10436507-10436616
Chromosome . Primary Identifier  I Chromosome Location . Start  10436507
Chromosome Location . End  10436616
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y106G6H.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47526 RPL-30, isoform c 10.2 94 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00095765
WBRNAi00026567
WBRNAi00022467
WBRNAi00026568
WBRNAi00108581
WBRNAi00108656
WBRNAi00091090
WBRNAi00093735
WBRNAi00116654
WBRNAi00075727
WBRNAi00085656
WBRNAi00073325
WBRNAi00036530
WBRNAi00073324
WBRNAi00073326
WBRNAi00055278
WBRNAi00108890
WBRNAi00108945
WBRNAi00109000
WBRNAi00109054
WBRNAi00108835

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y106G6H.3c 10436507 10436616 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004444 rpl-30 Y106G6H.3 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y106G6H.3c 10436507 10436616 1
CDS:Y106G6H.3c 10436670 10436844 1

1 Sequence

Length
285

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y106G6H.3c.1 Y106G6H.3c.1 520   I: 10436254-10436884
Transcript:Y106G6H.3c.2 Y106G6H.3c.2 374   I: 10436462-10436888