WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49D11.1 Sequence Name  F49D11.1
Length (nt)  1704   Chromosome Location  I: 10936840-10937527
Chromosome . Primary Identifier  I Chromosome Location . Start  10936840
Chromosome Location . End  10937527
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49D11.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28405 PRP-17 65.3 567 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00025558
WBRNAi00025559
WBRNAi00047821
WBRNAi00000059
WBRNAi00083811
WBRNAi00083618
WBRNAi00083568
WBRNAi00083722
WBRNAi00075262
WBRNAi00081376
WBRNAi00116738
WBRNAi00075263
WBRNAi00007350
WBRNAi00080087
WBRNAi00065726
WBRNAi00080169
WBRNAi00069382
WBRNAi00069383
WBRNAi00083482

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49D11.1 10936840 10937527 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018625 prp-17 F49D11.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49D11.1 10936840 10937527 1
CDS:F49D11.1 10938399 10939088 1
CDS:F49D11.1 10939514 10939733 1
CDS:F49D11.1 10940152 10940257 1

1 Sequence

Length
1704

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49D11.1.1 F49D11.1.1 1993   I: 10936815-10940521