WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28D9.2b.1 Sequence Name  F28D9.2b.1
Length (nt)  1038   Chromosome Location  I: 11182800-11186206
Chromosome . Primary Identifier  I Chromosome Location . Start  11182800
Chromosome Location . End  11186206 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D9.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005517 sri-5 F28D9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28D9.2b F28D9.2b 948   I: 11182817-11182984

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28D9.2b.1 11182800 11186206 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29385   185   I: 11182800-11182984 Caenorhabditis elegans
Exon29388   90   I: 11184271-11184360 Caenorhabditis elegans
Exon29390   299   I: 11184692-11184990 Caenorhabditis elegans
Exon29393   197   I: 11185129-11185325 Caenorhabditis elegans
Exon29395   115   I: 11185893-11186007 Caenorhabditis elegans
Exon29397   152   I: 11186055-11186206 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28D9.2b.1 11182800 11186206 1

1 Sequence

Length
1038

1 Sequence Ontology Term

Identifier Name Description
transcript