WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28D9.2b Sequence Name  F28D9.2b
Length (nt)  948   Chromosome Location  I: 11182817-11182984
Chromosome . Primary Identifier  I Chromosome Location . Start  11182817
Chromosome Location . End  11182984
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D9.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34483 SRI-5, isoform b 36.8 315 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00045836
WBRNAi00003517
WBRNAi00031530
WBRNAi00092946

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28D9.2b 11182817 11182984 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005517 sri-5 F28D9.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28D9.2b 11182817 11182984 1
CDS:F28D9.2b 11184271 11184360 1
CDS:F28D9.2b 11184692 11184990 1
CDS:F28D9.2b 11185129 11185325 1
CDS:F28D9.2b 11185893 11186007 1
CDS:F28D9.2b 11186055 11186133 1

1 Sequence

Length
948

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28D9.2b.1 F28D9.2b.1 1038   I: 11182800-11186206