WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H25P06.2a Sequence Name  H25P06.2a
Length (nt)  1338   Chromosome Location  I: 11323532-11323581
Chromosome . Primary Identifier  I Chromosome Location . Start  11323532
Chromosome Location . End  11323581
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H25P06.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37838 CDK-9, isoform a 50.1 445 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00077150
WBRNAi00049493
WBRNAi00025813
WBRNAi00025814
WBRNAi00081367
WBRNAi00077172
WBRNAi00077175
WBRNAi00108255
WBRNAi00077174
WBRNAi00106607
WBRNAi00008931
WBRNAi00096998
WBRNAi00086515
WBRNAi00086517
WBRNAi00096940
WBRNAi00077157
WBRNAi00077156
WBRNAi00077159
WBRNAi00096941
WBRNAi00077160
WBRNAi00033753
WBRNAi00077167
WBRNAi00116703
WBRNAi00077168

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H25P06.2a 11323532 11323581 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000410 cdk-9 H25P06.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:H25P06.2a 11323532 11323581 1
CDS:H25P06.2a 11324872 11324919 1
CDS:H25P06.2a 11325747 11325938 1
CDS:H25P06.2a 11326693 11326865 1
CDS:H25P06.2a 11327452 11327727 1
CDS:H25P06.2a 11328650 11328873 1
CDS:H25P06.2a 11330688 11330828 1
CDS:H25P06.2a 11330913 11330954 1
CDS:H25P06.2a 11331503 11331694 1

1 Sequence

Length
1338

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H25P06.2a.1 H25P06.2a.1 1356   I: 11323527-11331707