WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1e.1 Sequence Name  F15D3.1e.1
Length (nt)  4734   Chromosome Location  I: 11527077-11541127
Chromosome . Primary Identifier  I Chromosome Location . Start  11527077
Chromosome Location . End  11541127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1e F15D3.1e 4734   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1e.1 11527077 11541127 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30016   327   I: 11527077-11527403 Caenorhabditis elegans
Exon30026   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30035   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30045   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30053   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30060   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30067   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30074   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30081   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30088   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30095   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30102   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30109   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30116   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30123   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30132   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30139   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30146   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30154   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30158   389   I: 11540739-11541127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1e.1 11527077 11541127 -1

1 Sequence

Length
4734

1 Sequence Ontology Term

Identifier Name Description
transcript