WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1d.1 Sequence Name  F15D3.1d.1
Length (nt)  7548   Chromosome Location  I: 11527077-11546567
Chromosome . Primary Identifier  I Chromosome Location . Start  11527077
Chromosome Location . End  11546567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1d F15D3.1d 7548   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1d.1 11527077 11546567 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30017   327   I: 11527077-11527403 Caenorhabditis elegans
Exon30025   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30034   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30044   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30052   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30059   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30066   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30073   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30080   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30087   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30094   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30101   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30108   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30115   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30122   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30131   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30138   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30145   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30153   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30161   455   I: 11540739-11541193 Caenorhabditis elegans
Exon30167   75   I: 11541508-11541582 Caenorhabditis elegans
Exon30173   99   I: 11541908-11542006 Caenorhabditis elegans
Exon30179   144   I: 11542055-11542198 Caenorhabditis elegans
Exon30185   587   I: 11542614-11543200 Caenorhabditis elegans
Exon30191   163   I: 11543245-11543407 Caenorhabditis elegans
Exon30197   751   I: 11543579-11544329 Caenorhabditis elegans
Exon30203   284   I: 11544397-11544680 Caenorhabditis elegans
Exon30209   273   I: 11544835-11545107 Caenorhabditis elegans
Exon30215   111   I: 11545430-11545540 Caenorhabditis elegans
Exon30221   33   I: 11545667-11545699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1d.1 11527077 11546567 -1

1 Sequence

Length
7548

1 Sequence Ontology Term

Identifier Name Description
transcript