WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1i.1 Sequence Name  F15D3.1i.1
Length (nt)  10314   Chromosome Location  I: 11527077-11552106
Chromosome . Primary Identifier  I Chromosome Location . Start  11527077
Chromosome Location . End  11552106 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1i F15D3.1i 10314   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1i.1 11527077 11552106 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

42 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30020   327   I: 11527077-11527403 Caenorhabditis elegans
Exon30029   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30038   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30047   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30055   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30062   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30069   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30076   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30083   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30090   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30097   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30104   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30111   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30118   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30125   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30134   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30141   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30148   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30156   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30163   455   I: 11540739-11541193 Caenorhabditis elegans
Exon30169   75   I: 11541508-11541582 Caenorhabditis elegans
Exon30175   99   I: 11541908-11542006 Caenorhabditis elegans
Exon30181   144   I: 11542055-11542198 Caenorhabditis elegans
Exon30187   587   I: 11542614-11543200 Caenorhabditis elegans
Exon30193   163   I: 11543245-11543407 Caenorhabditis elegans
Exon30199   751   I: 11543579-11544329 Caenorhabditis elegans
Exon30205   284   I: 11544397-11544680 Caenorhabditis elegans
Exon30211   273   I: 11544835-11545107 Caenorhabditis elegans
Exon30217   111   I: 11545430-11545540 Caenorhabditis elegans
Exon30226   84   I: 11546118-11546201 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1i.1 11527077 11552106 -1

1 Sequence

Length
10314

1 Sequence Ontology Term

Identifier Name Description
transcript