WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22H2.6a.1 Sequence Name  T22H2.6a.1
Length (nt)  961   Chromosome Location  I: 11701852-11703698
Chromosome . Primary Identifier  I Chromosome Location . Start  11701852
Chromosome Location . End  11703698 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H2.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011936 pgrn-1 T22H2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H2.6a T22H2.6a 843   I: 11701865-11701909

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22H2.6a.1 11701852 11703698 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30630   58   I: 11701852-11701909 Caenorhabditis elegans
Exon30632   417   I: 11702157-11702573 Caenorhabditis elegans
Exon30634   246   I: 11703023-11703268 Caenorhabditis elegans
Exon30637   240   I: 11703459-11703698 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22H2.6a.1 11701852 11703698 1

1 Sequence

Length
961

1 Sequence Ontology Term

Identifier Name Description
transcript