WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47H9C.4a Sequence Name  Y47H9C.4a
Length (nt)  3336   Chromosome Location  I: 11851953-11852041
Chromosome . Primary Identifier  I Chromosome Location . Start  11851953
Chromosome Location . End  11852041
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20264 CED-1, isoform a 118.8 1111 Caenorhabditis elegans
 

Other

26 RNAi

WormBase ID
WBRNAi00066032
WBRNAi00056849
WBRNAi00004666
WBRNAi00097829
WBRNAi00097836
WBRNAi00097839
WBRNAi00097843
WBRNAi00097846
WBRNAi00098525
WBRNAi00098542
WBRNAi00087667
WBRNAi00087670
WBRNAi00087710
WBRNAi00065426
WBRNAi00087619
WBRNAi00037209
WBRNAi00097824
WBRNAi00113811
WBRNAi00087613
WBRNAi00087618
WBRNAi00087632
WBRNAi00092230
WBRNAi00097820
WBRNAi00116481
WBRNAi00075998
WBRNAi00078832

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47H9C.4a 11851953 11852041 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47H9C.4a 11851953 11852041 -1
CDS:Y47H9C.4a 11854279 11854476 -1
CDS:Y47H9C.4a 11855611 11855819 -1
CDS:Y47H9C.4a 11857037 11857325 -1
CDS:Y47H9C.4a 11858455 11858616 -1
CDS:Y47H9C.4a 11859665 11861027 -1
CDS:Y47H9C.4a 11862793 11863104 -1
CDS:Y47H9C.4a 11864482 11864747 -1
CDS:Y47H9C.4a 11865897 11866093 -1
CDS:Y47H9C.4a 11867068 11867169 -1
CDS:Y47H9C.4a 11867951 11868099 -1

1 Sequence

Length
3336

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47H9C.4a.1 Y47H9C.4a.1 3729   I: 11851566-11868105