WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09B3.1a.1 Sequence Name  R09B3.1a.1
Length (nt)  985   Chromosome Location  I: 11907571-11909251
Chromosome . Primary Identifier  I Chromosome Location . Start  11907571
Chromosome Location . End  11909251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09B3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001372 exo-3 R09B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09B3.1a R09B3.1a 867   I: 11907644-11907718

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09B3.1a.1 11907571 11909251 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31184   148   I: 11907571-11907718 Caenorhabditis elegans
Exon31185   216   I: 11908026-11908241 Caenorhabditis elegans
Exon31188   327   I: 11908302-11908628 Caenorhabditis elegans
Exon31192   294   I: 11908958-11909251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09B3.1a.1 11907571 11909251 -1

1 Sequence

Length
985

1 Sequence Ontology Term

Identifier Name Description
transcript