WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R09B3.1a Sequence Name  R09B3.1a
Length (nt)  867   Chromosome Location  I: 11907644-11907718
Chromosome . Primary Identifier  I Chromosome Location . Start  11907644
Chromosome Location . End  11907718
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09B3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16306 EXO-3, isoform a 32.9 288 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00051587
WBRNAi00022419
WBRNAi00112106
WBRNAi00027842
WBRNAi00092490
WBRNAi00112110
WBRNAi00007679
WBRNAi00097706
WBRNAi00116822
WBRNAi00111839
WBRNAi00097708

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R09B3.1a 11907644 11907718 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001372 exo-3 R09B3.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:R09B3.1a 11907644 11907718 -1
CDS:R09B3.1a 11908026 11908241 -1
CDS:R09B3.1a 11908302 11908628 -1
CDS:R09B3.1a 11908958 11909206 -1

1 Sequence

Length
867

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R09B3.1a.2 R09B3.1a.2 1009   I: 11907525-11909280
Transcript:R09B3.1a.1 R09B3.1a.1 985   I: 11907571-11909251