WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53C10A.4 Sequence Name  Y53C10A.4
Length (nt)  2727   Chromosome Location  I: 11979507-11979551
Chromosome . Primary Identifier  I Chromosome Location . Start  11979507
Chromosome Location . End  11979551
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C10A.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22372 RGA-2 100.6 908 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00057245
WBRNAi00111062
WBRNAi00004709
WBRNAi00026810
WBRNAi00026811
WBRNAi00037399
WBRNAi00068706
WBRNAi00068707
WBRNAi00068708
WBRNAi00068709
WBRNAi00068710
WBRNAi00026812
WBRNAi00064522
WBRNAi00117005
WBRNAi00069072

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53C10A.4 11979507 11979551 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013135 rga-2 Y53C10A.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53C10A.4 11979507 11979551 1
CDS:Y53C10A.4 11980549 11980676 1
CDS:Y53C10A.4 11980744 11980866 1
CDS:Y53C10A.4 11980920 11981034 1
CDS:Y53C10A.4 11981076 11981184 1
CDS:Y53C10A.4 11981843 11982044 1
CDS:Y53C10A.4 11982305 11983029 1
CDS:Y53C10A.4 11983286 11983637 1
CDS:Y53C10A.4 11983897 11984200 1
CDS:Y53C10A.4 11984397 11984745 1
CDS:Y53C10A.4 11984967 11985072 1
CDS:Y53C10A.4 11985270 11985438 1

1 Sequence

Length
2727

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53C10A.4.1 Y53C10A.4.1 3014   I: 11979401-11985619