WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F58D5.1a Sequence Name  F58D5.1a
Length (nt)  1836   Chromosome Location  I: 12060838-12060952
Chromosome . Primary Identifier  I Chromosome Location . Start  12060838
Chromosome Location . End  12060952
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58D5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36388 HRPR-1, isoform a 65.9 611 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00085670
WBRNAi00048968
WBRNAi00033285
WBRNAi00038556
WBRNAi00116576

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F58D5.1a 12060838 12060952 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002000 hrpr-1 F58D5.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F58D5.1a 12060838 12060952 -1
CDS:F58D5.1a 12061499 12061729 -1
CDS:F58D5.1a 12061776 12062218 -1
CDS:F58D5.1a 12062766 12062896 -1
CDS:F58D5.1a 12063111 12063246 -1
CDS:F58D5.1a 12063448 12063624 -1
CDS:F58D5.1a 12064231 12064677 -1
CDS:F58D5.1a 12064732 12064887 -1

1 Sequence

Length
1836

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F58D5.1a.1 F58D5.1a.1 2413   I: 12060271-12064897