WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01G12.12.2 Sequence Name  M01G12.12.2
Length (nt)  4811   Chromosome Location  I: 12098664-12105996
Chromosome . Primary Identifier  I Chromosome Location . Start  12098664
Chromosome Location . End  12105996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01G12.12.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004509 rrf-2 M01G12.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01G12.12 M01G12.12 4740   I: 12098716-12098876

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01G12.12.2 12098664 12105996 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31481   213   I: 12098664-12098876 Caenorhabditis elegans
Exon31484   108   I: 12098922-12099029 Caenorhabditis elegans
Exon31486   250   I: 12099430-12099679 Caenorhabditis elegans
Exon31488   530   I: 12099842-12100371 Caenorhabditis elegans
Exon31490   136   I: 12100503-12100638 Caenorhabditis elegans
Exon31492   180   I: 12100684-12100863 Caenorhabditis elegans
Exon31494   272   I: 12101191-12101462 Caenorhabditis elegans
Exon31496   202   I: 12101521-12101722 Caenorhabditis elegans
Exon31498   458   I: 12101774-12102231 Caenorhabditis elegans
Exon31500   112   I: 12102291-12102402 Caenorhabditis elegans
Exon31502   363   I: 12102462-12102824 Caenorhabditis elegans
Exon31504   180   I: 12102871-12103050 Caenorhabditis elegans
Exon31506   528   I: 12103096-12103623 Caenorhabditis elegans
Exon31508   267   I: 12103683-12103949 Caenorhabditis elegans
Exon31510   174   I: 12104013-12104186 Caenorhabditis elegans
Exon31512   147   I: 12104443-12104589 Caenorhabditis elegans
Exon31514   123   I: 12104632-12104754 Caenorhabditis elegans
Exon31516   285   I: 12104816-12105100 Caenorhabditis elegans
Exon31518   159   I: 12105161-12105319 Caenorhabditis elegans
Exon31520   124   I: 12105873-12105996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01G12.12.2 12098664 12105996 -1

1 Sequence

Length
4811

1 Sequence Ontology Term

Identifier Name Description
transcript