WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01G12.12.1 Sequence Name  M01G12.12.1
Length (nt)  4844   Chromosome Location  I: 12098671-12106112
Chromosome . Primary Identifier  I Chromosome Location . Start  12098671
Chromosome Location . End  12106112 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01G12.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004509 rrf-2 M01G12.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01G12.12 M01G12.12 4740   I: 12098716-12098876

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01G12.12.1 12098671 12106112 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31482   206   I: 12098671-12098876 Caenorhabditis elegans
Exon31483   108   I: 12098922-12099029 Caenorhabditis elegans
Exon31485   250   I: 12099430-12099679 Caenorhabditis elegans
Exon31487   530   I: 12099842-12100371 Caenorhabditis elegans
Exon31489   136   I: 12100503-12100638 Caenorhabditis elegans
Exon31491   180   I: 12100684-12100863 Caenorhabditis elegans
Exon31493   272   I: 12101191-12101462 Caenorhabditis elegans
Exon31495   202   I: 12101521-12101722 Caenorhabditis elegans
Exon31497   458   I: 12101774-12102231 Caenorhabditis elegans
Exon31499   112   I: 12102291-12102402 Caenorhabditis elegans
Exon31501   363   I: 12102462-12102824 Caenorhabditis elegans
Exon31503   180   I: 12102871-12103050 Caenorhabditis elegans
Exon31505   528   I: 12103096-12103623 Caenorhabditis elegans
Exon31507   267   I: 12103683-12103949 Caenorhabditis elegans
Exon31509   174   I: 12104013-12104186 Caenorhabditis elegans
Exon31511   147   I: 12104443-12104589 Caenorhabditis elegans
Exon31513   123   I: 12104632-12104754 Caenorhabditis elegans
Exon31515   285   I: 12104816-12105100 Caenorhabditis elegans
Exon31517   159   I: 12105161-12105319 Caenorhabditis elegans
Exon31519   115   I: 12105873-12105987 Caenorhabditis elegans
Exon31521   49   I: 12106064-12106112 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01G12.12.1 12098671 12106112 -1

1 Sequence

Length
4844

1 Sequence Ontology Term

Identifier Name Description
transcript