WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02A11.2.1 Sequence Name  W02A11.2.1
Length (nt)  785   Chromosome Location  I: 12733287-12741275
Chromosome . Primary Identifier  I Chromosome Location . Start  12733287
Chromosome Location . End  12741275 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02A11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012193 vps-25 W02A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02A11.2 W02A11.2 552   I: 12733419-12733534

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02A11.2.1 12733287 12741275 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon32934   248   I: 12733287-12733534 Caenorhabditis elegans
Exon32935   165   I: 12733932-12734096 Caenorhabditis elegans
Exon32937   54   I: 12734716-12734769 Caenorhabditis elegans
Exon32939   146   I: 12734973-12735118 Caenorhabditis elegans
Exon32941   71   I: 12736517-12736587 Caenorhabditis elegans
Exon32948   101   I: 12741175-12741275 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02A11.2.1 12733287 12741275 -1

1 Sequence

Length
785

1 Sequence Ontology Term

Identifier Name Description
transcript