WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W02A11.2 Sequence Name  W02A11.2
Length (nt)  552   Chromosome Location  I: 12733419-12733534
Chromosome . Primary Identifier  I Chromosome Location . Start  12733419
Chromosome Location . End  12733534
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02A11.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24025 VPS-25 21.5 183 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00067252
WBRNAi00067368
WBRNAi00054538
WBRNAi00004363
WBRNAi00036157
WBRNAi00078463
WBRNAi00092991
WBRNAi00116516
WBRNAi00075860

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W02A11.2 12733419 12733534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012193 vps-25 W02A11.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:W02A11.2 12733419 12733534 -1
CDS:W02A11.2 12733932 12734096 -1
CDS:W02A11.2 12734716 12734769 -1
CDS:W02A11.2 12734973 12735118 -1
CDS:W02A11.2 12736517 12736587 -1

1 Sequence

Length
552

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W02A11.2.1 W02A11.2.1 785   I: 12733287-12741275
Transcript:W02A11.2.2 W02A11.2.2 879   I: 12733287-12736782