WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y18D10A.1 Sequence Name  Y18D10A.1
Length (nt)  4905   Chromosome Location  I: 12788210-12788371
Chromosome . Primary Identifier  I Chromosome Location . Start  12788210
Chromosome Location . End  12788371
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18D10A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21397 ATTF-6 179.0 1634 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00055604
WBRNAi00026618
WBRNAi00078359
WBRNAi00004533
WBRNAi00026617
WBRNAi00117860

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y18D10A.1 12788210 12788371 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012474 attf-6 Y18D10A.1 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y18D10A.1 12788210 12788371 -1
CDS:Y18D10A.1 12790042 12790214 -1
CDS:Y18D10A.1 12791169 12791454 -1
CDS:Y18D10A.1 12792659 12792989 -1
CDS:Y18D10A.1 12794196 12794494 -1
CDS:Y18D10A.1 12795419 12796945 -1
CDS:Y18D10A.1 12798038 12798394 -1
CDS:Y18D10A.1 12800150 12800239 -1
CDS:Y18D10A.1 12800298 12800378 -1
CDS:Y18D10A.1 12800999 12801097 -1
CDS:Y18D10A.1 12802495 12803417 -1
CDS:Y18D10A.1 12804776 12805034 -1
CDS:Y18D10A.1 12806014 12806199 -1
CDS:Y18D10A.1 12806310 12806420 -1
CDS:Y18D10A.1 12806526 12806546 -1

1 Sequence

Length
4905

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y18D10A.1.1 Y18D10A.1.1 5207   I: 12787943-12806581