WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47B2.3.2 Sequence Name  C47B2.3.2
Length (nt)  1673   Chromosome Location  I: 12964677-12966795
Chromosome . Primary Identifier  I Chromosome Location . Start  12964677
Chromosome Location . End  12966795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47B2.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006529 tba-2 C47B2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47B2.3 C47B2.3 1347   I: 12964814-12964946

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47B2.3.2 12964677 12966795 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33263   270   I: 12964677-12964946 Caenorhabditis elegans
Exon33265   521   I: 12965000-12965520 Caenorhabditis elegans
Exon33267   701   I: 12965571-12966271 Caenorhabditis elegans
Exon33269   181   I: 12966615-12966795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47B2.3.2 12964677 12966795 -1

1 Sequence

Length
1673

1 Sequence Ontology Term

Identifier Name Description
transcript