WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47B2.3 Sequence Name  C47B2.3
Length (nt)  1347   Chromosome Location  I: 12964814-12964946
Chromosome . Primary Identifier  I Chromosome Location . Start  12964814
Chromosome Location . End  12964946
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47B2.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17563 TBA-2 49.9 448 Caenorhabditis elegans
 

Other

46 RNAi

WormBase ID
WBRNAi00095526
WBRNAi00063581
WBRNAi00081310
WBRNAi00099911
WBRNAi00100376
WBRNAi00066711
WBRNAi00064970
WBRNAi00090811
WBRNAi00100750
WBRNAi00101239
WBRNAi00101277
WBRNAi00101296
WBRNAi00099305
WBRNAi00099507
WBRNAi00099709
WBRNAi00101258
WBRNAi00101099
WBRNAi00080496
WBRNAi00076220
WBRNAi00028214
WBRNAi00000017
WBRNAi00024834
WBRNAi00024835
WBRNAi00042650
WBRNAi00087081
WBRNAi00087080
WBRNAi00087082
WBRNAi00065703
WBRNAi00100002
WBRNAi00100189

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C47B2.3 12964814 12964946 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006529 tba-2 C47B2.3 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C47B2.3 12964814 12964946 -1
CDS:C47B2.3 12965000 12965520 -1
CDS:C47B2.3 12965571 12966263 -1

1 Sequence

Length
1347

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47B2.3.1 C47B2.3.1 1495   I: 12964674-12966271
Transcript:C47B2.3.2 C47B2.3.2 1673   I: 12964677-12966795