WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:CC4.3.2 Sequence Name  CC4.3.2
Length (nt)  1830   Chromosome Location  I: 12995803-13012859
Chromosome . Primary Identifier  I Chromosome Location . Start  12995803
Chromosome Location . End  13012859 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
CC4.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004895 smu-1 CC4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CC4.3 CC4.3 1533   I: 12995889-12995917

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:CC4.3.2 12995803 13012859 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33333   115   I: 12995803-12995917 Caenorhabditis elegans
Exon33336   67   I: 12996005-12996071 Caenorhabditis elegans
Exon33338   144   I: 12996125-12996268 Caenorhabditis elegans
Exon33340   400   I: 12996565-12996964 Caenorhabditis elegans
Exon33342   125   I: 12997957-12998081 Caenorhabditis elegans
Exon33344   230   I: 12998929-12999158 Caenorhabditis elegans
Exon33346   97   I: 12999472-12999568 Caenorhabditis elegans
Exon33348   189   I: 13000535-13000723 Caenorhabditis elegans
Exon33350   70   I: 13001228-13001297 Caenorhabditis elegans
Exon33352   83   I: 13001485-13001567 Caenorhabditis elegans
Exon33353   291   I: 13004040-13004330 Caenorhabditis elegans
Exon33367   19   I: 13012841-13012859 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:CC4.3.2 12995803 13012859 1

1 Sequence

Length
1830

1 Sequence Ontology Term

Identifier Name Description
transcript