WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:CC4.3 Sequence Name  CC4.3
Length (nt)  1533   Chromosome Location  I: 12995889-12995917
Chromosome . Primary Identifier  I Chromosome Location . Start  12995889
Chromosome Location . End  12995917
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
CC4.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE15742 SMU-1 57.2 510 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00043298
WBRNAi00003250
WBRNAi00083609
WBRNAi00083757
WBRNAi00083847
WBRNAi00116873

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:CC4.3 12995889 12995917 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004895 smu-1 CC4.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:CC4.3 12995889 12995917 1
CDS:CC4.3 12996005 12996071 1
CDS:CC4.3 12996125 12996268 1
CDS:CC4.3 12996565 12996964 1
CDS:CC4.3 12997957 12998081 1
CDS:CC4.3 12998929 12999158 1
CDS:CC4.3 12999472 12999568 1
CDS:CC4.3 13000535 13000723 1
CDS:CC4.3 13001228 13001297 1
CDS:CC4.3 13001485 13001567 1
CDS:CC4.3 13004040 13004138 1

1 Sequence

Length
1533

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CC4.3.2 CC4.3.2 1830   I: 12995803-13012859
Transcript:CC4.3.1 CC4.3.1 1815   I: 12995803-13004334