WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:CC4.3.1 Sequence Name  CC4.3.1
Length (nt)  1815   Chromosome Location  I: 12995803-13004334
Chromosome . Primary Identifier  I Chromosome Location . Start  12995803
Chromosome Location . End  13004334 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
CC4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004895 smu-1 CC4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CC4.3 CC4.3 1533   I: 12995889-12995917

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:CC4.3.1 12995803 13004334 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33334   115   I: 12995803-12995917 Caenorhabditis elegans
Exon33335   67   I: 12996005-12996071 Caenorhabditis elegans
Exon33337   144   I: 12996125-12996268 Caenorhabditis elegans
Exon33339   400   I: 12996565-12996964 Caenorhabditis elegans
Exon33341   125   I: 12997957-12998081 Caenorhabditis elegans
Exon33343   230   I: 12998929-12999158 Caenorhabditis elegans
Exon33345   97   I: 12999472-12999568 Caenorhabditis elegans
Exon33347   189   I: 13000535-13000723 Caenorhabditis elegans
Exon33349   70   I: 13001228-13001297 Caenorhabditis elegans
Exon33351   83   I: 13001485-13001567 Caenorhabditis elegans
Exon33354   295   I: 13004040-13004334 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:CC4.3.1 12995803 13004334 1

1 Sequence

Length
1815

1 Sequence Ontology Term

Identifier Name Description
transcript