WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK256.1a.3 Sequence Name  ZK256.1a.3
Length (nt)  3393   Chromosome Location  I: 13011428-13023624
Chromosome . Primary Identifier  I Chromosome Location . Start  13011428
Chromosome Location . End  13023624 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK256.1a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004063 pmr-1 ZK256.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK256.1a ZK256.1a 2706   I: 13012220-13012531

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK256.1a.3 13011428 13023624 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon33357   268   I: 13011428-13011695 Caenorhabditis elegans
Exon33364   399   I: 13012133-13012531 Caenorhabditis elegans
Exon33371   231   I: 13013377-13013607 Caenorhabditis elegans
Exon33376   276   I: 13013670-13013945 Caenorhabditis elegans
Exon33381   574   I: 13015161-13015734 Caenorhabditis elegans
Exon33386   303   I: 13019187-13019489 Caenorhabditis elegans
Exon33391   385   I: 13020257-13020641 Caenorhabditis elegans
Exon33397   265   I: 13021486-13021750 Caenorhabditis elegans
Exon33401   241   I: 13022388-13022628 Caenorhabditis elegans
Exon33406   451   I: 13023174-13023624 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK256.1a.3 13011428 13023624 1

1 Sequence

Length
3393

1 Sequence Ontology Term

Identifier Name Description
transcript